pg_repack -- Reorganize tables in PostgreSQL databases with minimal locks

pg_repack is a PostgreSQL extension which lets you remove bloat from tables and indexes, and optionally restore the physical order of clustered indexes. Unlike CLUSTER and VACUUM FULL it works online, without holding an exclusive lock on the processed tables during processing. pg_repack is efficient to boot, with performance comparable to using CLUSTER directly.

pg_repack is a fork of the previous pg_reorg project. Please check the project page for bug report and development information.

You can choose one of the following methods to reorganize:

  • Online CLUSTER (ordered by cluster index)
  • Ordered by specified columns
  • Online VACUUM FULL (packing rows only)
  • Rebuild or relocate only the indexes of a table

NOTICE:

  • Only superusers can use the utility.
  • Target table must have a PRIMARY KEY, or at least a UNIQUE total index on a NOT NULL column.

Requirements

PostgreSQL versions
PostgreSQL 9.4, 9.5, 9.6, 10, 11, 12, 13
Disks
Performing a full-table repack requires free disk space about twice as large as the target table(s) and its indexes. For example, if the total size of the tables and indexes to be reorganized is 1GB, an additional 2GB of disk space is required.

Download

You can download pg_repack from the PGXN website. Unpack the archive and follow the installation instructions.

Alternatively you can use the PGXN Client to download, compile and install the package; use:

$ pgxn install pg_repack

Check the pgxn install documentation for the options available.

Installation

pg_repack can be built with make on UNIX or Linux. The PGXS build framework is used automatically. Before building, you might need to install the PostgreSQL development packages (postgresql-devel, etc.) and add the directory containing pg_config to your $PATH. Then you can run:

$ cd pg_repack
$ make
$ sudo make install

You can also use Microsoft Visual C++ 2010 to build the program on Windows. There are project files in the msvc folder.

After installation, load the pg_repack extension in the database you want to process. pg_repack is packaged as an extension, so you can execute:

$ psql -c "CREATE EXTENSION pg_repack" -d your_database

You can remove pg_repack using DROP EXTENSION pg_repack or just dropping the repack schema.

If you are upgrading from a previous version of pg_repack or pg_reorg, just drop the old version from the database as explained above and install the new version.

Usage

pg_repack [OPTION]... [DBNAME]

The following options can be specified in OPTIONS.

Options:
-a, --all repack all databases
-t, --table=TABLE
 repack specific table only
-I, --parent-table=TABLE
 repack specific parent table and its inheritors
-c, --schema=SCHEMA
 repack tables in specific schema only
-s, --tablespace=TBLSPC
 move repacked tables to a new tablespace
-S, --moveidx move repacked indexes to TBLSPC too
-o, --order-by=COLUMNS
 order by columns instead of cluster keys
-n, --no-order do vacuum full instead of cluster
-N, --dry-run print what would have been repacked and exit
-j, --jobs=NUM Use this many parallel jobs for each table
-i, --index=INDEX
 move only the specified index
-x, --only-indexes
 move only indexes of the specified table
-T, --wait-timeout=SECS
 timeout to cancel other backends on conflict
-D, --no-kill-backend
 don't kill other backends when timed out
-Z, --no-analyze
 don't analyze at end
-k, --no-superuser-check
 skip superuser checks in client
-C, --exclude-extension
 don't repack tables which belong to specific extension
Connection options:
-d, --dbname=DBNAME
 database to connect
-h, --host=HOSTNAME
 database server host or socket directory
-p, --port=PORT
 database server port
-U, --username=USERNAME
 user name to connect as
-w, --no-password
 never prompt for password
-W, --password force password prompt
Generic options:
-e, --echo echo queries
-E, --elevel=LEVEL
 set output message level
--help show this help, then exit
--version output version information, then exit

Reorg Options

-a, --all
Attempt to repack all the databases of the cluster. Databases where the pg_repack extension is not installed will be skipped.
-t TABLE, --table=TABLE
Reorganize the specified table(s) only. Multiple tables may be reorganized by writing multiple -t switches. By default, all eligible tables in the target databases are reorganized.
-I TABLE, --parent-table=TABLE
Reorganize both the specified table(s) and its inheritors. Multiple table hierarchies may be reorganized by writing multiple -I switches.
-c, --schema
Repack the tables in the specified schema(s) only. Multiple schemas may be repacked by writing multiple -c switches. May be used in conjunction with --tablespace to move tables to a different tablespace.
-o COLUMNS [,...], --order-by=COLUMNS [,...]
Perform an online CLUSTER ordered by the specified columns.
-n, --no-order
Perform an online VACUUM FULL. Since version 1.2 this is the default for non-clustered tables.
-N, --dry-run
List what would be repacked and exit.
-j, --jobs
Create the specified number of extra connections to PostgreSQL, and use these extra connections to parallelize the rebuild of indexes on each table. Parallel index builds are only supported for full-table repacks, not with --index or --only-indexes options. If your PostgreSQL server has extra cores and disk I/O available, this can be a useful way to speed up pg_repack.
-s TBLSPC, --tablespace=TBLSPC
Move the repacked tables to the specified tablespace: essentially an online version of ALTER TABLE ... SET TABLESPACE. The tables' indexes are left in the original tablespace unless --moveidx is specified too.
-S, --moveidx
Also move the indexes of the repacked tables to the tablespace specified by the --tablespace option.
-i, --index
Repack the specified index(es) only. Multiple indexes may be repacked by writing multiple -i switches. May be used in conjunction with --tablespace to move the index to a different tablespace.
-x, --only-indexes
Repack only the indexes of the specified table(s), which must be specified with the --table or --parent-table options.
-T SECS, --wait-timeout=SECS
pg_repack needs to take an exclusive lock at the end of the reorganization. This setting controls how many seconds pg_repack will wait to acquire this lock. If the lock cannot be taken after this duration and --no-kill-backend option is not specified, pg_repack will forcibly cancel the conflicting queries. If you are using PostgreSQL version 8.4 or newer, pg_repack will fall back to using pg_terminate_backend() to disconnect any remaining backends after twice this timeout has passed. The default is 60 seconds.
-D, --no-kill-backend
Skip to repack table if the lock cannot be taken for duration specified --wait-timeout, instead of cancelling conflicting queries. The default is false.
-Z, --no-analyze
Disable ANALYZE after a full-table reorganization. If not specified, run ANALYZE after the reorganization.
-k, --no-superuser-check
Skip the superuser checks in the client. This setting is useful for using pg_repack on platforms that support running it as non-superusers.
-C, --exclude-extension
Skip tables that belong to the specified extension(s). Some extensions may heavily depend on such tables at planning time etc.

Connection Options

Options to connect to servers. You cannot use --all and --dbname or --table or --parent-table together.

-a, --all
Reorganize all databases.
-d DBNAME, --dbname=DBNAME
Specifies the name of the database to be reorganized. If this is not specified and -a (or --all) is not used, the database name is read from the environment variable PGDATABASE. If that is not set, the user name specified for the connection is used.
-h HOSTNAME, --host=HOSTNAME
Specifies the host name of the machine on which the server is running. If the value begins with a slash, it is used as the directory for the Unix domain socket.
-p PORT, --port=PORT
Specifies the TCP port or local Unix domain socket file extension on which the server is listening for connections.
-U USERNAME, --username=USERNAME
User name to connect as.
-w, --no-password
Never issue a password prompt. If the server requires password authentication and a password is not available by other means such as a .pgpass file, the connection attempt will fail. This option can be useful in batch jobs and scripts where no user is present to enter a password.
-W, --password

Force the program to prompt for a password before connecting to a database.

This option is never essential, since the program will automatically prompt for a password if the server demands password authentication. However, pg_repack will waste a connection attempt finding out that the server wants a password. In some cases it is worth typing -W to avoid the extra connection attempt.

Generic Options

-e, --echo
Echo commands sent to server.
-E LEVEL, --elevel=LEVEL
Choose the output message level from DEBUG, INFO, NOTICE, WARNING, ERROR, LOG, FATAL, and PANIC. The default is INFO.
--help
Show usage of the program.
--version
Show the version number of the program.

Environment

PGDATABASE, PGHOST, PGPORT, PGUSER

Default connection parameters

This utility, like most other PostgreSQL utilities, also uses the environment variables supported by libpq (see Environment Variables).

Examples

Perform an online CLUSTER of all the clustered tables in the database test, and perform an online VACUUM FULL of all the non-clustered tables:

$ pg_repack test

Perform an online VACUUM FULL on the tables foo and bar in the database test (an eventual cluster index is ignored):

$ pg_repack --no-order --table foo --table bar test

Move all indexes of table foo to tablespace tbs:

$ pg_repack -d test --table foo --only-indexes --tablespace tbs

Move the specified index to tablespace tbs:

$ pg_repack -d test --index idx --tablespace tbs

Diagnostics

Error messages are reported when pg_repack fails. The following list shows the cause of errors.

You need to cleanup by hand after fatal errors. To cleanup, just remove pg_repack from the database and install it again: for PostgreSQL 9.1 and following execute DROP EXTENSION pg_repack CASCADE in the database where the error occurred, followed by CREATE EXTENSION pg_repack; for previous version load the script $SHAREDIR/contrib/uninstall_pg_repack.sql into the database where the error occured and then load $SHAREDIR/contrib/pg_repack.sql again.

INFO: database "db" skipped: pg_repack VER is not installed in the database

pg_repack is not installed in the database when the --all option is specified.

Create the pg_repack extension in the database.

ERROR: pg_repack VER is not installed in the database

pg_repack is not installed in the database specified by --dbname.

Create the pg_repack extension in the database.

ERROR: program 'pg_repack V1' does not match database library 'pg_repack V2'

There is a mismatch between the pg_repack binary and the database library (.so or .dll).

The mismatch could be due to the wrong binary in the $PATH or the wrong database being addressed. Check the program directory and the database; if they are what expected you may need to repeat pg_repack installation.

ERROR: extension 'pg_repack V1' required, found extension 'pg_repack V2'

The SQL extension found in the database does not match the version required by the pg_repack program.

You should drop the extension from the database and reload it as described in the installation section.

ERROR: relation "table" must have a primary key or not-null unique keys

The target table doesn't have a PRIMARY KEY or any UNIQUE constraints defined.

Define a PRIMARY KEY or a UNIQUE constraint on the table.

ERROR: query failed: ERROR: column "col" does not exist

The target table doesn't have columns specified by --order-by option.

Specify existing columns.

WARNING: the table "tbl" already has a trigger called repack_trigger

The trigger was probably installed during a previous attempt to run pg_repack on the table which was interrupted and for some reason failed to clean up the temporary objects.

You can remove all the temporary objects by dropping and re-creating the extension: see the installation section for the details.

ERROR: Another pg_repack command may be running on the table. Please try again later.
There is a chance of deadlock when two concurrent pg_repack commands are run on the same table. So, try to run the command after some time.
WARNING: Cannot create index "schema"."index_xxxxx", already exists

DETAIL: An invalid index may have been left behind by a previous pg_repack on the table which was interrupted. Please use DROP INDEX "schema"."index_xxxxx" to remove this index and try again.

A temporary index apparently created by pg_repack has been left behind, and we do not want to risk dropping this index ourselves. If the index was in fact created by an old pg_repack job which didn't get cleaned up, you should just use DROP INDEX and try the repack command again.

Restrictions

pg_repack comes with the following restrictions.

Temp tables

pg_repack cannot reorganize temp tables.

GiST indexes

pg_repack cannot cluster tables by GiST indexes.

DDL commands

You will not be able to perform DDL commands of the target table(s) except VACUUM or ANALYZE while pg_repack is working. pg_repack will hold an ACCESS SHARE lock on the target table during a full-table repack, to enforce this restriction.

If you are using version 1.1.8 or earlier, you must not attempt to perform any DDL commands on the target table(s) while pg_repack is running. In many cases pg_repack would fail and rollback correctly, but there were some cases in these earlier versions which could result in data corruption.

Details

Full Table Repacks

To perform a full-table repack, pg_repack will:

  1. create a log table to record changes made to the original table
  2. add a trigger onto the original table, logging INSERTs, UPDATEs and DELETEs into our log table
  3. create a new table containing all the rows in the old table
  4. build indexes on this new table
  5. apply all changes which have accrued in the log table to the new table
  6. swap the tables, including indexes and toast tables, using the system catalogs
  7. drop the original table

pg_repack will only hold an ACCESS EXCLUSIVE lock for a short period during initial setup (steps 1 and 2 above) and during the final swap-and-drop phase (steps 6 and 7). For the rest of its time, pg_repack only needs to hold an ACCESS SHARE lock on the original table, meaning INSERTs, UPDATEs, and DELETEs may proceed as usual.

Index Only Repacks

To perform an index-only repack, pg_repack will:

  1. create new indexes on the table using CONCURRENTLY matching the definitions of the old indexes
  2. swap out the old for the new indexes in the catalogs
  3. drop the old indexes

Creating indexes concurrently comes with a few caveats, please see the documentation for details.

Releases

  • pg_repack 1.4.6
    • Added support for PostgreSQL 13
    • Dropped support for PostgreSQL before 9.4
  • pg_repack 1.4.5
    • Added support for PostgreSQL 12
    • Fixed parallel processing for indexes with operators from public schema
  • pg_repack 1.4.4
    • Added support for PostgreSQL 11 (issue #181)
    • Remove duplicate password prompt (issue #184)
  • pg_repack 1.4.3
    • Fixed possible CVE-2018-1058 attack paths (issue #168)
    • Fixed "unexpected index definition" after CVE-2018-1058 changes in PostgreSQL (issue #169)
    • Fixed build with recent Ubuntu packages (issue #179)
  • pg_repack 1.4.2
    • added PostgreSQL 10 support (issue #120)
    • fixed error DROP INDEX CONCURRENTLY cannot run inside a transaction block (issue #129)
  • pg_repack 1.4.1
    • fixed broken --order-by option (issue #138)
  • pg_repack 1.4
    • added support for PostgreSQL 9.6, dropped support for versions before 9.1
    • use AFTER trigger to solve concurrency problems with INSERT CONFLICT (issue #106)
    • added --no-kill-backend option (issue #108)
    • added --no-superuser-check option (issue #114)
    • added --exclude-extension option (#97)
    • added --parent-table option (#117)
    • restore TOAST storage parameters on repacked tables (issue #10)
    • restore columns storage types in repacked tables (issue #94)
  • pg_repack 1.3.4
    • grab exclusive lock before dropping original table (issue #81)
    • do not attempt to repack unlogged tables (issue #71)
  • pg_repack 1.3.3
    • Added support for PostgreSQL 9.5
    • Fixed possible deadlock when pg_repack command is interrupted (issue #55)
    • Fixed exit code for when pg_repack is invoked with --help and --version
    • Added Japanese language user manual
  • pg_repack 1.3.2
    • Fixed to clean up temporary objects when pg_repack command is interrupted.
    • Fixed possible crash when pg_repack shared library is loaded alongside pg_statsinfo (issue #43).
  • pg_repack 1.3.1
    • Added support for PostgreSQL 9.4.
  • pg_repack 1.3
    • Added --schema to repack only the specified schema (issue #20).
    • Added --dry-run to do a dry run (issue #21).
    • Fixed advisory locking for >2B OID values (issue #30).
    • Avoid possible deadlock when other sessions lock a to-be-repacked table (issue #32).
    • Performance improvement for performing sql_pop DELETEs many-at-a-time.
    • Attempt to avoid pg_repack taking forever when dealing with a constant heavy stream of changes to a table.
  • pg_repack 1.2
    • Support PostgreSQL 9.3.
    • Added --tablespace and --moveidx options to perform online SET TABLESPACE.
    • Added --index to repack the specified index only.
    • Added --only-indexes to repack only the indexes of the specified table
    • Added --jobs option for parallel operation.
    • Don't require --no-order to perform a VACUUM FULL on non-clustered tables (pg_repack issue #6).
    • Don't wait for locks held in other databases (pg_repack issue #11).
    • Bugfix: correctly handle key indexes with options such as DESC, NULL FIRST/LAST, COLLATE (pg_repack issue #3).
    • Fixed data corruption bug on delete (pg_repack issue #23).
    • More helpful program output and error messages.
  • pg_repack 1.1.8
    • Added support for PostgreSQL 9.2.
    • Added support for CREATE EXTENSION on PostgreSQL 9.1 and following.
    • Give user feedback while waiting for transactions to finish (pg_reorg issue #5).
    • Bugfix: Allow running on newly promoted streaming replication slaves (pg_reorg issue #1).
    • Bugfix: Fix interaction between pg_repack and Slony 2.0/2.1 (pg_reorg issue #4)
    • Bugfix: Properly escape column names (pg_reorg issue #6).
    • Bugfix: Avoid recreating invalid indexes, or choosing them as key (pg_reorg issue #9).
    • Bugfix: Never choose a partial index as primary key (pg_reorg issue #22).
  • pg_reorg 1.1.7 (2011-08-07)
    • Bugfix: VIEWs and FUNCTIONs could be corrupted that used a reorganized table which has a dropped column.
    • Supports PostgreSQL 9.1 and 9.2dev. (but EXTENSION is not yet)

See Also